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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015926721.1_cds_XP_016474690.1_66692
CDS Infomation

[gene=LOC107796436] [db_xref=GeneID:107796436] [protein=NAD-dependent malic enzyme 59 kDa isoform, mitochondrial-like isoform X3] [protein_id=XP_016474690.1] [location=complement(join(17026..17066,17362..17448,17533..17605,18306..18371,18569..18682,19008..19101,19224..19330,21047..21130,21218..21321,21471..21531,22032..22160,22497..22664,22752..22870,24724..24820,26310..26438))] [gbkey=CDS]
Sequence

ATGTTGAGAGCGGCTCGATCTGCGGCGTCGAATCTCCGCGGTACACGGCGGTTCTCTACG
GCTATTCCATCTCCAAGTATCGTCCACAAGCGTGGTGCTGATATTCTTCACGATCCTTGG
TTCAACAAGGACACAGGATTCCCTATGACGGAAAGAGATCGATTGGGGCTGCGCGGTCTC
CTCCCACCACGTGTAATATCCTTTGAACAGCAATATGAGCGCTTCATGGAATCATTTCAT
TCGCTTGAGAAAAATACTGAAGGTCAACCAGACAGTGTTGTCTCGCTAGCAAAATGGAGG
ATCTTAAACAGGCTGCATGACAGGAATGAGACATTGTACTACCGAGTTCTAATTGACAAT
ATCAAAGATTTTGCTCCCATAATATACACTCCAACAGTAGGATTGGTTTGCCAAAACTAC
TCTGGCTTGTTTAGACGTCCACGTGGCATGTATTTCAGTGCCAAAGATAAGGGAGAGATG
ATGTCAATGATCTTTAACTGGCCTTCTACTCAGGTAGACATGATTGTGCTGACAGATGGA
AGCCGTATTCTTGGCCTTGGCGATCTTGGAGTTCAGGGGATAGGTATACCAATTGGCAAA
CTTGACATGTACGTAGCAGCTGCTGGTATCAACCCACAAAGAGTGCTCCCAGTCATGCTT
GACGTTGGTACCAACAATCAGAAGCTTCTGGAAGACCCTCTTTATCTTGGGCTGCGACAA
CCTAGGCTGGAAGGAGAAGAATATTTGTCAATAGTTGATGAATTTGTGGAAGCTGTTCAT
GCTCGTTGGCCAAAGGCTGTTGTGCAGTTTGAGGATTTTCAAGCAAAGTGGGCTTTTGAG
ACACTGGATCGCTATCGGAAAAAGTTTTGCATGTTCAATGATGACATACAGGGAACAGCC
GGTGTTGCTCTTGCTGGGCTATTAGGAACTGTTAGGGCACAGGGCCGGCCATTGACTGAT
TTTGCCAATCAAAAGATAGTGGTAGTCGGAGCAGGAAGTGCGGGGCTTGGTGTTCTTAAG
ATGGCATTACAAGCTGTTTCAAGAATGGGTGGATCATCAGCAGATCCCCACTTTTTTCTT
CTGGATAAAAATGGTCTTATCACGAAACATAGGAAAGATATTGATCTAGCAGCATTACCA
TTTGCTAAAGCCCAACATGAGATTGAGGAGTTAGGACTACAGGAGGGAGCAGGTCTCCTT
GAAGTGGTAAAAAAGGTGAAGCCTCATGTGCTTCTTGGTTTGTCAGGAGTTGGAGGTATA
TTTCATGAGGAGGTGCTGAGGGCCATGCGAGAGTCAGATTCTGTTAGACCTGCTATTTTT
GCCATGTCAAATCCCACAAACAATGCTGAATGCTGCCCTCTTGATGCTTTCAAGCTTGCT
GGGGAAAAAATTGTTTTTGCTAGTGGGAGTCCCTTTGCAAATGTTGATCTAGCATTGGTC
TGGGAGCTCTTCTCTCTGGCGCTCGAAACATAA

Peptide Sequence

PEP ID

XP_016474690.1
PEP Infomation

PREDICTED: NAD-dependent malic enzyme 59 kDa isoform, mitochondrial-like isoform X3 [Nicotiana tabacum]
Sequence

MLRAARSAASNLRGTRRFSTAIPSPSIVHKRGADILHDPWFNKDTGFPMTERDRLGLRGL
LPPRVISFEQQYERFMESFHSLEKNTEGQPDSVVSLAKWRILNRLHDRNETLYYRVLIDN
IKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIFNWPSTQVDMIVLTDG
SRILGLGDLGVQGIGIPIGKLDMYVAAAGINPQRVLPVMLDVGTNNQKLLEDPLYLGLRQ
PRLEGEEYLSIVDEFVEAVHARWPKAVVQFEDFQAKWAFETLDRYRKKFCMFNDDIQGTA
GVALAGLLGTVRAQGRPLTDFANQKIVVVGAGSAGLGVLKMALQAVSRMGGSSADPHFFL
LDKNGLITKHRKDIDLAALPFAKAQHEIEELGLQEGAGLLEVVKKVKPHVLLGLSGVGGI
FHEEVLRAMRESDSVRPAIFAMSNPTNNAECCPLDAFKLAGEKIVFASGSPFANVDLALV
WELFSLALET

Transcript Sequence

Gene sequence data has not been registered.